Allergen Data Collection - Update: Rice (Oryza sativa)
Internet Symposium on Food Allergens 3(Suppl.2): 1-17 (2001) [http://www.food-allergens.de]
6.2 14-16 kDa Rice Allergens

6.2.1 Molecular Biological Properties
 
14-16 kDa Rice Allergens References
Allergen Nomenclature   
Isoallergens and Variants
At least 7 isoallergens of 14-16 kDa rice allergens which share > 67% amino acid sequence identity (2) fullfilling the definition of isoallergens of the WHO/IUIS Allergen Nomenclature Subcommittee (1)
(1) King et al. 1994
(2) Matsuda et al. 1996
Molecular Masses 
14-16 kDa (SDS-PAGE) (1)
(1) Matsuda et al. 1991
Isoelectric Points pI 6-8 (1)
(1) Matsuda et al. 1991
Amino Acid Sequence,mRNA, and cDNA
 Isoallergens RA14
(2)
RA14B
(3)
RA14C
(3)
RA5
(2)
RA5B
(3)
RA16
(3)
SWISS-PROT: Q01882 Q01881
GenBank: D11432 D42139 D42140 D11430 D42142 D42141
PIR: S31080 S59922 S59923 S31078 S59925 S59924
Amino Acids 139 166 160 131 160 157
mRNA 
precursor
618 bp 643 bp 606 bp 618 bp 631bp 631 bp
cDNA
precursor
           

 Isoallergens RA17
(1, 2)
RAG1
(2)
RAG2
(2)
RA138
(4)
RA
SWISS-PROT: Q01883 Q01884 Q01885    
GenBank: D11431 D11433 D11434   AF042200
PIR: S21157 S31081 S31082   T02664
Amino Acids 135 1-95 * 140 133 157
mRNA 
precursor
636 bp       709 bp
cDNA
precursor
  1286 bp 1603 bp 477 bp  
 * partial sequence
(1) Izumi et al. 1992
(2) Adachi et al. 1993
(3) Alvarez et al. 1995a
(4) Oh et al. 1998
cDNA Library / Recombinant Proteins
cDNA library:
cDNA clones from maturing (1, 3, 4) and developing (5) seeds encoding rice allergens
cDNA library screened with a rat anti-16 kD globulin protein polyclonal antibody, 5 independent cDNA clones were obtained which encoded 13-19 kD recombinant proteins identified by immunoblot analysis (6) 

Expression in Escherichia coli:
Expression of 4 rice allergens (2)

(1) Adachi et al. 1993
(2) Alvarez et al. 1995b
(3) Matsuda et al. 1996
(4) Nakamura & Matsuda 1996
(5) Oh et al. 1998
(6) Kim et al. 1999
Posttranslational Modifications
Disulfide bonds:
5 disulfide bonds (1, 2)
(1) Nakase et al. 1998
(2) Izumi et al. 1999
3D-Structure
3D-Structure prediction of 16-kDa allergen: compactly folded protein, small hydrophobic core, rich in sheet and helix structures (1)
(1) Nakase et al. 1998
Biological Function
alpha-amylase/trypsin inhibitor family (1)
Inhibitory activity toward human salvary alpha- amylase, not to bacterial alpha- amylase (2)
(1) Alvarez et al. 1995a, b
(2) Nakase et al. 1996
Sequence Homology
14-16 kDa Rice allergens: sequence identities DNA > 80%, aa > 70% (2, 3)
Alpha-amylase / trypsin inhibitors from wheat and barley: DNA sequence identities 20-40% (1, 3, 4, 5)
Alpha-amylase / trypsin inhibitor family: well conserved 10 cystein residues region (1, 3)
Castor bean storage protein: (1)
Lipid transfer proteins:  sequence of 25 C-terminal aa of 14-16 kDa rice allergen clones resembles plant lipid transfer proteins (2)
(1) Izumi et al. 1992
(2) Alvarez et al. 1995a
(3) Matsuda et al. 1996
(4) Nakamura & Matsuda 1996
(5) Nakase et al. 1998
Localization
Maturing rice seeds (2)
Albumin / globulin protein fractions (1)
(1) Matsuda et al. 1991
(2) Matsuda et al. 1996

 6.2.2 Allergenic Properties
 
14-16 kDa Rice Allergens References
Frequency of Sensitization
IgE-binding to 14-16 kDa rice allergens in 67-100% of patients (1)
IgE-binding to 14-16 kDa isoallergens (2):
a) 14-15.5 kDa allergen in 64%
b) RA14 (~16 kDa) gene family, 3 isolated fractions: 41% (for 1 fraction) and 29% (other 2 fractions) 
c) RA17 (14-15.5 kDa) in 29%
(17 rice allergic patients, RAST)
(1) see 6.1 Sensitization to Rice Allergens
(2) Nakase et al. 1996

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